#include "molfile_plugin.h"
#include <stdio.h>
#include <string.h>
#include <stdlib.h>
Go to the source code of this file.
Compounds | |
struct | cordata |
Defines | |
#define | COR_RECORD_LENGTH 141 |
Functions | |
void | strip_whitespace (char *str, int n) |
char * | corgets (char *s, int n, FILE *stream) |
FILE * | open_cor_file (const char *fname, int *natom, int *iofoext) |
int | get_cor_atom (FILE *f, char *atomName, char *atomType, char *resName, char *segName, int *resId, int ioext) |
void * | open_cor_read (const char *path, const char *filetype, int *natoms) |
int | read_cor_structure (void *v, int *optflags, molfile_atom_t *atoms) |
int | read_cor_timestep (void *v, int natoms, molfile_timestep_t *ts) |
void | close_cor_read (void *mydata) |
VMDPLUGIN_API int | VMDPLUGIN_init () |
VMDPLUGIN_API int | VMDPLUGIN_register (void *v, vmdplugin_register_cb cb) |
VMDPLUGIN_API int | VMDPLUGIN_fini () |
Variables | |
molfile_plugin_t | plugin |
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Definition at line 31 of file corplugin.c. Referenced by get_cor_atom, open_cor_file, and read_cor_timestep. |
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Definition at line 333 of file corplugin.c. References cordata::file. |
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Definition at line 62 of file corplugin.c. Referenced by get_cor_atom, and read_cor_timestep. |
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Definition at line 138 of file corplugin.c. References COR_RECORD_LENGTH, corgets, and strip_whitespace. Referenced by read_cor_structure. |
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Definition at line 86 of file corplugin.c. References COR_RECORD_LENGTH, and MOLFILE_NUMATOMS_NONE. Referenced by open_cor_read. |
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Definition at line 233 of file corplugin.c. References cordata::file, cordata::iofoext, cordata::numatoms, and open_cor_file. |
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Definition at line 250 of file corplugin.c. References molfile_atom_t::chain, cordata::file, get_cor_atom, cordata::iofoext, MOLFILE_ERROR, MOLFILE_NOOPTIONS, MOLFILE_SUCCESS, molfile_atom_t::name, cordata::numatoms, molfile_atom_t::resid, molfile_atom_t::resname, molfile_atom_t::segid, and molfile_atom_t::type. |
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Definition at line 273 of file corplugin.c. References molfile_timestep_t::coords, COR_RECORD_LENGTH, corgets, cordata::file, cordata::iofoext, MOLFILE_ERROR, and MOLFILE_SUCCESS. |
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Definition at line 34 of file corplugin.c. Referenced by get_cor_atom. |
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Definition at line 371 of file corplugin.c. References VMDPLUGIN_API, and VMDPLUGIN_SUCCESS. |
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Definition at line 362 of file corplugin.c. References VMDPLUGIN_API, and VMDPLUGIN_SUCCESS. |
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Definition at line 366 of file corplugin.c. References VMDPLUGIN_API, vmdplugin_register_cb, and VMDPLUGIN_SUCCESS. |
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Initial value: { vmdplugin_ABIVERSION, MOLFILE_PLUGIN_TYPE, "cor", "CHARMM Coordinates", "Eamon Caddigan, John Stone", 0, 7, VMDPLUGIN_THREADSAFE, "cor", open_cor_read, read_cor_structure, 0, read_cor_timestep, close_cor_read } Definition at line 345 of file corplugin.c. |